Publications

141 publications

(2026). The complete genome of a songbird. CELL.
(2026). A Complete Genome for the Common Marmoset. CELL.
(2026). Jim Watson (1928–2025): a genomics visionary. GENOME RES.
(2026). HPRC2: A human pangenome reference with near-complete coverage of common genetic variation. BIORXIV.
(2026). The Vertebrate Genomes Project Phase I: A global reference genome resource. BIORXIV.
(2026). Population-scale Y chromosome assemblies reveal recurrent remodeling within constrained architectures. BIORXIV.
(2026). Non-canonical DNA and sequencing challenges in bird genomes. BIORXIV.
(2025). Complete sequencing of ape genomes. NATURE.
(2024). The Complete Sequence and Comparative Analysis of Ape Sex Chromosomes. NATURE.
(2023). The complete sequence of a human Y chromosome. NATURE.
(2022). Whole-genome sequence and assembly of the Javan gibbon (Hylobates moloch). J HERED.
(2021). Towards complete and error-free genome assemblies of all vertebrate species. NATURE.
(2018). Correcting palindromes in long reads after whole-genome amplification. BMC GENOMICS.
(2014). The Intervention Nurses Start Infants Growing on Healthy Trajectories (INSIGHT) study. BMC PEDIATR.
(2013). Mature Microsatellites: Mechanisms Underlying Dinucleotide Microsatellite Mutational Biases in Human Cells. G3-GENES GENOM GENET.
(2013). The origin, evolution, and functional impact of short insertion–deletion variants identified in 179 human genomes. GENOME RES.
(2012). SMBE Proposal to the Government of Japan. MOL BIOL EVOL.
(2011). Harnessing cloud computing with Galaxy Cloud. NAT BIOTECHNOL.
(2010). Complete Khoisan and Bantu genomes from southern Africa. NATURE.
(2007). Evolutionary and Biomedical Insights from the Rhesus Macaque Genome. SCIENCE.
(2007). A framework for collaborative analysis of ENCODE data: Making large-scale analyses biologist-friendly. GENOME RES.
(2005). Initial sequence of the chimpanzee genome and comparison with the human genome. NATURE.
(2004). Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. NATURE.
(2004). COMPARATIVE GENOMICS. ANNU REV GENOM HUM G.
(2004). Genome sequence of the Brown Norway rat yields insights into mammalian evolution. NATURE.
(2002). Chromosome-wide SNPs reveal an ancient origin for Plasmodium falciparum. NATURE.