Penn State University
Center for Comparative Genomics and Bioinformatics


The CCGB is part of the Huck Institutes of the Life Sciences.  Our address is:  501 Wartik Laboratory, University Park, PA 16802.

Mission | Activities | Comparative Genomics of Mammals


In the News

Jan. 2008 -- Penn State Live: Probing Question: What is metagenomics?

Nov. 2007 -- The CCGB is featured on the current radio show from The DNA Files. Broadcast on WPSU and WHYY for the next few weeks, or listen online.

Mar. 2004 -- PSU Press Release: Rat Genome Sequence

Research Groups

Chiaromonte Lab | Hardison Lab | Lesk Lab | Makova Lab | Miller Lab | Nekrutenko Lab | Pugh Lab | Schuster Lab

Projects

 --  Database of experimental results on gene expression
 --  Visualization tools for bacterial genome alignments
 --  Genome alignment and annotation database
 --  Metaserver for integrative analysis of genomic data
 --  Database of human hemoglobin variants and thalassemias
 --  Dynamic multi-sequence alignment and visualization
 --  Connects phenotype and clinical data in locus-specific databases with the UCSC Genome Browser
 --  Pairwise and multiple alignments of user-submitted DNA sequences
 --  Retrieve data from the UCSC Genome Browser in a format suitable for further processing by PipMaker and MultiPipMaker
 --  Regulatory potential based on conservation, composition, and short-pattern structure (see also ESPERR)
 --  Method for learning discriminative signals from multiple alignments
 --  Interactive browser for annotated genome sequences of human and other organisms
 --  Dynamic blastz alignment visualization

Resources

Schedule for Lab Meetings and Seminars
Course Materials
Links to Related Sites
Local Access Page


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