Fig 1: Enrichment plot: GOBP_NUCLEOSOME_ORGANIZATION
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | de_results_collapsed |
| Phenotype | NoPhenotypeAvailable |
| Upregulated in class | na_pos |
| GeneSet | GOBP_NUCLEOSOME_ORGANIZATION |
| Enrichment Score (ES) | 0.50841707 |
| Normalized Enrichment Score (NES) | 2.9602199 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0 |
| FWER p-Value | 0.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | H2BC12 | H2B clustered histone 12 [Source:HGNC Symbol;Acc:HGNC:13954] | 33 | 7.423 | 0.0425 | Yes |
| 2 | H2BC14 | H2B clustered histone 14 [Source:HGNC Symbol;Acc:HGNC:4750] | 174 | 5.208 | 0.0120 | Yes |
| 3 | H2BC7 | H2B clustered histone 7 [Source:HGNC Symbol;Acc:HGNC:4752] | 193 | 5.068 | 0.0434 | Yes |
| 4 | H2AW | H2A.W histone [Source:HGNC Symbol;Acc:HGNC:20507] | 225 | 4.876 | 0.0664 | Yes |
| 5 | H4C11 | H4 clustered histone 11 [Source:HGNC Symbol;Acc:HGNC:4785] | 248 | 4.803 | 0.0936 | Yes |
| 6 | H2BC5 | H2B clustered histone 5 [Source:HGNC Symbol;Acc:HGNC:4747] | 279 | 4.611 | 0.1151 | Yes |
| 7 | H2BC18 | H2B clustered histone 18 [Source:HGNC Symbol;Acc:HGNC:24700] | 309 | 4.515 | 0.1363 | Yes |
| 8 | HMGB2 | high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000] | 378 | 4.234 | 0.1352 | Yes |
| 9 | H2BC15 | H2B clustered histone 15 [Source:HGNC Symbol;Acc:HGNC:4749] | 408 | 4.126 | 0.1533 | Yes |
| 10 | H2BS1 | H2B.S histone 1 [Source:HGNC Symbol;Acc:HGNC:4762] | 410 | 4.122 | 0.1858 | Yes |
| 11 | CTCF | CCCTC-binding factor [Source:HGNC Symbol;Acc:HGNC:13723] | 416 | 4.106 | 0.2162 | Yes |
| 12 | H2BU1 | H2B.U histone 1 [Source:HGNC Symbol;Acc:HGNC:20514] | 456 | 3.982 | 0.2280 | Yes |
| 13 | H4C13 | H4 clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4791] | 477 | 3.932 | 0.2492 | Yes |
| 14 | DAXX | death domain associated protein [Source:HGNC Symbol;Acc:HGNC:2681] | 496 | 3.895 | 0.2711 | Yes |
| 15 | H2BC6 | H2B clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4753] | 517 | 3.832 | 0.2915 | Yes |
| 16 | HIRA | histone cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:4916] | 518 | 3.831 | 0.3222 | Yes |
| 17 | H3C13 | H3 clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:25311] | 530 | 3.801 | 0.3470 | Yes |
| 18 | H2BC13 | H2B clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4748] | 563 | 3.725 | 0.3603 | Yes |
| 19 | H2BC11 | H2B clustered histone 11 [Source:HGNC Symbol;Acc:HGNC:4761] | 582 | 3.688 | 0.3806 | Yes |
| 20 | HAT1 | histone acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4821] | 590 | 3.669 | 0.4064 | Yes |
| 21 | ACTR6 | actin related protein 6 [Source:HGNC Symbol;Acc:HGNC:24025] | 595 | 3.657 | 0.4337 | Yes |
| 22 | SHPRH | SNF2 histone linker PHD RING helicase [Source:HGNC Symbol;Acc:HGNC:19336] | 603 | 3.648 | 0.4593 | Yes |
| 23 | CHAF1B | chromatin assembly factor 1 subunit B [Source:HGNC Symbol;Acc:HGNC:1911] | 622 | 3.617 | 0.4790 | Yes |
| 24 | H1-4 | "H1.4 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4718]" | 682 | 3.514 | 0.4767 | Yes |
| 25 | H1-10 | H1.10 linker histone [Source:HGNC Symbol;Acc:HGNC:4722] | 702 | 3.481 | 0.4948 | Yes |
| 26 | H2BC4 | H2B clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4757] | 730 | 3.433 | 0.5084 | Yes |
| 27 | LIN54 | lin-54 DREAM MuvB core complex component [Source:HGNC Symbol;Acc:HGNC:25397] | 805 | 3.309 | 0.4968 | No |
| 28 | NFE2 | "nuclear factor, erythroid 2 [Source:HGNC Symbol;Acc:HGNC:7780]" | 884 | -3.348 | 0.4834 | No |
| 29 | SMARCD3 | "SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]" | 1419 | -4.362 | 0.2429 | No |
| 30 | PADI4 | peptidyl arginine deiminase 4 [Source:HGNC Symbol;Acc:HGNC:18368] | 1622 | -4.950 | 0.1784 | No |
