Bringing in a gene dataset

Any gene dataset will work. Each has its own advantages and disadvantages. We will use the RefSeq Genes a curated dataset. We will continue to use the BX table browser and Human build hg19. This time we want the group Genes and Gene Prediction Tracks, the track RefSeq Genes, and the table refGene. When a track is selected if there is a table with genome coordinates that is the one that will be default for the table. We want genome for the region and BED for the output. Click get output (green arrow).

This time you will see all the options available for a BED file, but we just want the Whole gene so click Send query to Galaxy on the next page.