Exclusion of the SNPs from the 24 healthy individuals is useful for
finding both coding and non-coding disease variants, so we will again
start with the dataset we prepared in Part 1. In the Operate on
Genomic Intervals section of the tool panel, select the Intersect
tool. An intersection between our input dataset and the PRPs will
find the SNPs within the predicted regulatory regions. The output
will have the columns from the first dataset, so be sure to specify
the SNPs as the first dataset and the PRPs as the second one.
![[screen shot]](prpsIntersectWithArrows.png)